Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculokinase | SAMEA3752620_01260 | Not Available | Negative | 1369931 - 1371349 | 52231.6 |
| l-fucose isomerase | SAMEA3752620_01261 | Not Available | Negative | 1371458 - 1373233 | 65007.4 |
| l-fucose permease | SAMEA3752620_01262 | Not Available | Negative | 1373266 - 1374582 | 47581.6 |
| l-fuculose phosphate aldolase | SAMEA3752620_01263 | Not Available | Positive | 1375129 - 1375776 | 23786.7 |
| lactaldehyde reductase (propanediol oxidoreductase) | SAMEA3752620_01264 | Not Available | Positive | 1375804 - 1376952 | 40545.8 |
| 5'-3' exonuclease | SAMEA3752620_01265 | Not Available | Negative | 1377007 - 1377852 | 31493.0 |
| l-serine dehydratase 2 | SAMEA3752620_01266 | Not Available | Negative | 1377873 - 1379240 | 48751.9 |
| serine transporter | SAMEA3752620_01267 | Not Available | Negative | 1379298 - 1380587 | 46923.3 |
| putative decarboxylase | SAMEA3752620_01268 | Not Available | Negative | 1381143 - 1382507 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | SAMEA3752620_01269 | Not Available | Negative | 1382619 - 1383467 | 32531.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





