Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin-coregulated protein hcp | SAMEA3752620_01239 | Not Available | Negative | 1353984 - 1354475 | 18637.8 |
| ompa family membrane protein | SAMEA3752620_01240 | Not Available | Negative | 1354533 - 1356185 | 60515.4 |
| dotu family type iv/vi secretion system protein | SAMEA3752620_01241 | Not Available | Negative | 1356198 - 1356863 | 25311.8 |
| type vi secretion protein | SAMEA3752620_01242 | Not Available | Negative | 1356860 - 1358197 | 49505.6 |
| type vi secretion protein evpb | SAMEA3752620_01243 | Not Available | Negative | 1358217 - 1359755 | 58035.7 |
| type vi secretion protein | SAMEA3752620_01244 | Not Available | Negative | 1359814 - 1360314 | 18638.3 |
| Trna-met | Not Available | Not Available | Positive | 1360946 - 1361022 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1361056 - 1361132 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1361166 - 1361242 | Not Available |
| membrane-bound lytic murein transglycosylase a | SAMEA3752620_01248 | Not Available | Positive | 1361451 - 1362548 | 40441.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





