Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3752620_01229 | Not Available | Negative | 1339394 - 1339819 | 16231.4 |
| pyocin large subunit | SAMEA3752620_01230 | Not Available | Negative | 1339812 - 1341218 | 51780.9 |
| type vi secretion-associated protein | SAMEA3752620_01231 | Not Available | Negative | 1341224 - 1342861 | 60929.1 |
| imcf domain-containing protein | SAMEA3752620_01232 | Not Available | Negative | 1342827 - 1346210 | 126179.0 |
| uncharacterised protein | SAMEA3752620_01233 | Not Available | Negative | 1346210 - 1347424 | 44670.9 |
| uncharacterised protein | SAMEA3752620_01234 | Not Available | Negative | 1347530 - 1347973 | 17299.1 |
| n-acetylmuramoyl-l-alanine amidase | SAMEA3752620_01235 | Not Available | Negative | 1347989 - 1348642 | 24995.1 |
| vgr-related protein | SAMEA3752620_01236 | Not Available | Negative | 1348675 - 1351155 | 91761.7 |
| atp-dependent clp proteinase atp-binding chain | SAMEA3752620_01237 | Not Available | Negative | 1351167 - 1352393 | 45599.6 |
| atp-dependent clp proteinase atp-binding chain | SAMEA3752620_01238 | Not Available | Negative | 1352338 - 1353792 | 53578.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





