Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative parb nuclease | SAMEA3752620_02983 | Not Available | Negative | 3121503 - 3122294 | 29765.2 |
| rac prophage | SAMEA3752620_02984 | Not Available | Negative | 3122432 - 3123856 | 52684.3 |
| Cell lysis protein | SAMEA3752620_02985 | Not Available | Negative | 3124027 - 3124491 | 17286.7 |
| Lysozyme | SAMEA3752620_02986 | Not Available | Negative | 3124488 - 3124985 | 18045.0 |
| Putative holin | SAMEA3752620_02987 | Not Available | Negative | 3124985 - 3125200 | 7806.51 |
| tola protein (fragment) of prophage | SAMEA3752620_02988 | Not Available | Negative | 3125452 - 3125847 | 14512.2 |
| tola protein (fragment) of prophage | SAMEA3752620_02989 | Not Available | Negative | 3125998 - 3126426 | 15743.7 |
| uncharacterised protein | SAMEA3752620_02991 | Not Available | Negative | 3127205 - 3127342 | 4986.28 |
| antitermination protein | SAMEA3752620_02992 | Not Available | Negative | 3127471 - 3128013 | 20626.3 |
| Hypothetical protein | SAMEA3752620_02993 | Not Available | Negative | 3128010 - 3128300 | 10797.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





