Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyltransferase | SAMEA3752620_01187 | Not Available | Positive | 1290258 - 1291439 | 40997.1 |
| 5-keto-4-deoxyuronate isomerase | SAMEA3752620_01188 | Not Available | Positive | 1291726 - 1292562 | 31092.2 |
| 2-keto-3-deoxygluconate oxidoreductase | SAMEA3752620_01189 | Not Available | Positive | 1292592 - 1293353 | 27056.7 |
| arabinose-proton symporter | SAMEA3752620_01190 | Not Available | Positive | 1293668 - 1295086 | 51727.8 |
| putative asp/glu/hydantoin racemase | SAMEA3752620_01191 | Not Available | Positive | 1295215 - 1295907 | 25242.4 |
| lysr family transcriptional regulator | SAMEA3752620_01192 | Not Available | Negative | 1295894 - 1296829 | 34424.7 |
| diaminopimelate decarboxylase | SAMEA3752620_01193 | Not Available | Positive | 1296951 - 1298213 | 46178.1 |
| galactose operon repressor | SAMEA3752620_01194 | Not Available | Negative | 1298220 - 1299251 | 37136.3 |
| aas bifunctional protein | SAMEA3752620_01197 | Not Available | Positive | 1299837 - 1301996 | 80742.9 |
| major facilitator superfamily protein | SAMEA3752620_01198 | Not Available | Positive | 1301989 - 1303182 | 41589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





