Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidase | SAMEA3752620_01177 | Not Available | Negative | 1277468 - 1278679 | 44806.4 |
| putative diaminopropionate ammonia-lyase | SAMEA3752620_01178 | Not Available | Negative | 1278737 - 1279933 | 43344.1 |
| putative aspartate/ornithine carbamoyltransferase | SAMEA3752620_01179 | Not Available | Negative | 1279991 - 1281178 | 44057.7 |
| transcriptional regulator | SAMEA3752620_01180 | Not Available | Positive | 1281659 - 1283437 | 66085.0 |
| xanthine dehydrogenase iron-sulfur-binding subunit | SAMEA3752620_01181 | Not Available | Negative | 1283477 - 1283956 | 16904.7 |
| xanthine dehydrogenase fad-binding subunit | SAMEA3752620_01182 | Not Available | Negative | 1283953 - 1284831 | 31530.5 |
| xanthine dehydrogenase subunit xdha | SAMEA3752620_01183 | Not Available | Negative | 1284842 - 1287139 | 82632.0 |
| lipoprotein yger | SAMEA3752620_01184 | Not Available | Positive | 1287553 - 1288305 | 26452.9 |
| Trna-gly | Not Available | Not Available | Positive | 1288384 - 1288457 | Not Available |
| membrane protein | SAMEA3752620_01186 | Not Available | Negative | 1288774 - 1290003 | 45101.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





