Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-specific exonuclease | SAMEA3752620_01157 | Not Available | Positive | 1249518 - 1251251 | 63376.6 |
| peptide chain release factor 2 | SAMEA3752620_01158 | Not Available | Positive | 1251559 - 1252440 | 32850.3 |
| lysyl-trna synthetase | SAMEA3752620_01159 | Not Available | Positive | 1252450 - 1253967 | 57606.8 |
| isopentenyl-diphosphate delta-isomerase | SAMEA3752620_01160 | Not Available | Negative | 1254010 - 1254558 | 20517.3 |
| small predicted membrane protein | SAMEA3752620_01161 | Not Available | Negative | 1254680 - 1254805 | 4757.28 |
| purine permease ygfu | SAMEA3752620_01162 | Not Available | Negative | 1254807 - 1256255 | 51779.4 |
| oxidoreductase fe-s binding subunit | SAMEA3752620_01163 | Not Available | Positive | 1256691 - 1258610 | 69167.9 |
| electron transport protein ygfs | SAMEA3752620_01164 | Not Available | Positive | 1258610 - 1259098 | 17514.3 |
| putative permease | SAMEA3752620_01165 | Not Available | Negative | 1259134 - 1260501 | 46761.0 |
| guanine deaminase | SAMEA3752620_01166 | Not Available | Negative | 1260537 - 1261853 | 50102.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





