Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | SAMEA3752620_01115 | Not Available | Positive | 1206196 - 1208187 | 72099.6 |
| putative membrane protease | SAMEA3752620_01116 | Not Available | Negative | 1208233 - 1209141 | 33096.9 |
| mannitol-specific cryptic pts system iiia component | SAMEA3752620_01117 | Not Available | Positive | 1209519 - 1209962 | 16045.2 |
| mannitol-specific cryptic pts system eiicb component | SAMEA3752620_01118 | Not Available | Positive | 1209990 - 1211378 | 48946.1 |
| putative oxidoreductase | SAMEA3752620_01119 | Not Available | Positive | 1211393 - 1212670 | 46068.3 |
| putative sugar-bisphosphatase | SAMEA3752620_01120 | Not Available | Positive | 1212667 - 1213632 | 34291.4 |
| putative transcriptional regulator | SAMEA3752620_01121 | Not Available | Positive | 1213654 - 1214163 | 19372.1 |
| putative atp/gtp-binding protein | SAMEA3752620_01122 | Not Available | Positive | 1214160 - 1214873 | 27175.4 |
| erythrose 4-phosphate dehydrogenase | SAMEA3752620_01123 | Not Available | Positive | 1215158 - 1216177 | 37301.5 |
| phosphoglycerate kinase | SAMEA3752620_01124 | Not Available | Positive | 1216227 - 1217390 | 41120.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





