Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative c4-dicarboxylate transport system binding protein | SAMEA3752620_01095 | Not Available | Negative | 1187362 - 1188348 | 36515.9 |
| putative oxygen-independent coproporphyrinogen iii oxidase | SAMEA3752620_01096 | Not Available | Negative | 1188665 - 1189801 | 42561.5 |
| deoxyribonucleotide triphosphate pyrophosphatase | SAMEA3752620_01097 | Not Available | Negative | 1189794 - 1190387 | 20979.9 |
| conserved protein, upf0235 family | SAMEA3752620_01098 | Not Available | Negative | 1190395 - 1190685 | 10443.8 |
| membrane protein yggt | SAMEA3752620_01099 | Not Available | Negative | 1190682 - 1191248 | 21168.5 |
| putative amino acid racemase | SAMEA3752620_01100 | Not Available | Negative | 1191266 - 1191970 | 25788.9 |
| twitching motility family protein | SAMEA3752620_01101 | Not Available | Positive | 1191988 - 1192968 | 35989.4 |
| putative holliday junction resolvase | SAMEA3752620_01102 | Not Available | Negative | 1193142 - 1193558 | 15187.2 |
| protein yqge | SAMEA3752620_01103 | Not Available | Negative | 1193558 - 1194121 | 20628.1 |
| glutathione synthetase | SAMEA3752620_01104 | Not Available | Negative | 1194230 - 1195180 | 35502.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





