Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | SAMEA3752620_01075 | Not Available | Negative | 1166806 - 1167504 | 25152.6 |
| putative oxidoreductase subunit with nad(p)-binding domain and ferridoxin-like domain | SAMEA3752620_01076 | Not Available | Negative | 1167509 - 1168924 | 52626.7 |
| hydroxyacid oxidoreductase (fe-s centre) | SAMEA3752620_01077 | Not Available | Negative | 1168936 - 1169655 | 26149.8 |
| l-lactate permease | SAMEA3752620_01078 | Not Available | Negative | 1169705 - 1171261 | 54340.6 |
| periplasmic oligopeptide-binding protein (fragment) | SAMEA3752620_01079 | Not Available | Positive | 1171598 - 1171762 | 5597.74 |
| integrase | SAMEA3752620_01080 | Not Available | Negative | 1172124 - 1173386 | 47894.9 |
| Trna-phe | Not Available | Not Available | Positive | 1173584 - 1173659 | Not Available |
| membrane protein yqga | SAMEA3752620_01082 | Not Available | Negative | 1173765 - 1174472 | 24645.5 |
| ornithine decarboxylase | SAMEA3752620_01083 | Not Available | Positive | 1174864 - 1176999 | 79463.6 |
| nucleoside permease | SAMEA3752620_01084 | Not Available | Negative | 1177045 - 1178301 | 46392.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





