Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase subunit | SAMEA3752620_01065 | Not Available | Negative | 1151290 - 1151940 | 24256.3 |
| transporter protein | SAMEA3752620_01066 | Not Available | Negative | 1152232 - 1153596 | 50215.6 |
| regulatory protein | SAMEA3752620_01067 | Not Available | Positive | 1154130 - 1155212 | 40234.7 |
| regulatory protein | SAMEA3752620_01068 | Not Available | Positive | 1155209 - 1157218 | 75954.9 |
| transport activator | SAMEA3752620_01069 | Not Available | Positive | 1157208 - 1158455 | 47506.4 |
| uncharacterised protein | SAMEA3752620_01070 | Not Available | Positive | 1158498 - 1158941 | 17422.0 |
| putative dna-binding protein | SAMEA3752620_01071 | Not Available | Positive | 1159164 - 1159802 | 24841.9 |
| putative type i restriction-modification system, dna-methyltransferase subunit m | SAMEA3752620_01072 | Not Available | Positive | 1160139 - 1161758 | 60723.1 |
| restriction modification system dna specificity domain-containing protein | SAMEA3752620_01073 | Not Available | Positive | 1161748 - 1163052 | 48380.7 |
| type i restriction-modification system (hsdr-like) | SAMEA3752620_01074 | Not Available | Positive | 1163147 - 1166401 | 124583.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





