Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | SAMEA3752620_00992 | Not Available | Positive | 1078084 - 1078872 | 28664.0 |
| sec-independent protein translocase protein | SAMEA3752620_00993 | Not Available | Positive | 1079001 - 1079204 | 7024.71 |
| lipoyl synthase lipa | SAMEA3752620_00994 | Not Available | Negative | 1079305 - 1080270 | 36073.8 |
| lysr family transcriptional regulator | SAMEA3752620_00995 | Not Available | Negative | 1080479 - 1081432 | 35881.4 |
| lipoate-protein ligase b | SAMEA3752620_00996 | Not Available | Negative | 1081692 - 1082333 | 23900.0 |
| protein ybed | SAMEA3752620_00997 | Not Available | Negative | 1082434 - 1082697 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase | SAMEA3752620_00998 | Not Available | Negative | 1082807 - 1084018 | 44446.5 |
| rare lipoprotein a | SAMEA3752620_00999 | Not Available | Negative | 1084158 - 1085246 | 37502.0 |
| rod shape-determining protein roda | SAMEA3752620_01000 | Not Available | Negative | 1085257 - 1086369 | 40478.6 |
| penicillin-binding protein 2 | SAMEA3752620_01001 | Not Available | Negative | 1086372 - 1088273 | 70860.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





