Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylase | SAMEA3752620_00927 | Not Available | Negative | 1006726 - 1007382 | 24032.8 |
| outer membrane protease | SAMEA3752620_00928 | Not Available | Negative | 1007626 - 1008579 | 35592.2 |
| uncharacterised protein | SAMEA3752620_00929 | Not Available | Negative | 1009237 - 1010127 | 33040.5 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3752620_00930 | Not Available | Negative | 1010128 - 1011207 | 40454.1 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3752620_00931 | Not Available | Negative | 1011286 - 1013100 | 67986.6 |
| bacteriophage n4 adsorption protein b | SAMEA3752620_00932 | Not Available | Negative | 1013087 - 1015324 | 85376.4 |
| sensor kinase cuss | SAMEA3752620_00933 | Not Available | Negative | 1015474 - 1016916 | 53761.2 |
| two-component system response regulator | SAMEA3752620_00934 | Not Available | Negative | 1016906 - 1017589 | 25396.1 |
| copper/silver efflux system outer membrane protein cusc | SAMEA3752620_00935 | Not Available | Positive | 1017746 - 1019128 | 50812.0 |
| cation efflux system protein | SAMEA3752620_00936 | Not Available | Positive | 1019152 - 1019484 | 12326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





