Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole carboxylase atpase subunit | SAMEA3752620_00916 | Not Available | Negative | 999118 - 1000185 | 39512.4 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | SAMEA3752620_00917 | Not Available | Negative | 1000182 - 1000691 | 17781.3 |
| udp-2,3-diacylglucosamine hydrolase | SAMEA3752620_00918 | Not Available | Negative | 1000808 - 1001530 | 26867.6 |
| peptidyl-prolyl cis-trans isomerase b | SAMEA3752620_00919 | Not Available | Negative | 1001533 - 1002027 | 18168.5 |
| cysteinyl-trna synthetase | SAMEA3752620_00920 | Not Available | Positive | 1002201 - 1003586 | 52186.9 |
| putative membrane-bound metal-dependent hydrolase | SAMEA3752620_00921 | Not Available | Negative | 1003622 - 1004143 | 19511.6 |
| putative rna-binding protein | SAMEA3752620_00922 | Not Available | Negative | 1004251 - 1004463 | 7389.95 |
| 5,10-methylene-tetrahydrofolate dehydrogenase | SAMEA3752620_00923 | Not Available | Negative | 1004465 - 1005331 | 30987.6 |
| Trna-arg | Not Available | Not Available | Positive | 1005602 - 1005678 | Not Available |
| dna integration/recombination/invertion protein | SAMEA3752620_00925 | Not Available | Negative | 1006014 - 1006313 | 11202.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





