Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3752620_01549 | Not Available | Positive | 1660542 - 1660907 | 13230.9 |
| uncharacterised protein | SAMEA3752620_01550 | Not Available | Negative | 1660876 - 1661076 | 7690.12 |
| division inhibition protein | SAMEA3752620_01552 | Not Available | Positive | 1661579 - 1661767 | 6964.7 |
| putative prophage protein | SAMEA3752620_01553 | Not Available | Positive | 1661764 - 1661955 | 6814.29 |
| Attr | Not Available | Not Available | Positive | 1662039 - 1662050 | Not Available |
| Endodeoxyribonuclease | SAMEA3752620_01554 | Not Available | Positive | 1662049 - 1664520 | 92805.6 |
| Bacteriophage excisionase | SAMEA3752620_01555 | Not Available | Positive | 1664608 - 1664844 | 9213.09 |
| Putative integrase | SAMEA3752620_01556 | Not Available | Positive | 1664879 - 1666159 | 48385.3 |
| protein, truncated | SAMEA3752620_01557 | Not Available | Negative | 1666161 - 1666289 | 4863.84 |
| Attr | Not Available | Not Available | Positive | 1666303 - 1666314 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





