Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Antitermination protein q | SAMEA3752620_01538 | Not Available | Negative | 1652522 - 1653274 | 28040.9 |
| Hypothetical protein | SAMEA3752620_01539 | Not Available | Negative | 1653288 - 1654337 | 39316.5 |
| putative prophage protein | SAMEA3752620_01540 | Not Available | Negative | 1654684 - 1654935 | 9277.3 |
| Rela/spot family protein | SAMEA3752620_01542 | Not Available | Negative | 1656042 - 1657067 | 39509.8 |
| Lygf | SAMEA3752620_01543 | Not Available | Negative | 1657601 - 1658002 | 15492.8 |
| Replication protein | SAMEA3752620_01544 | Not Available | Negative | 1658043 - 1659008 | 37085.1 |
| Putative cii repressor | SAMEA3752620_01545 | Not Available | Negative | 1658989 - 1659510 | 19950.8 |
| Putative cro anti-repressor | SAMEA3752620_01546 | Not Available | Negative | 1659494 - 1659721 | 8267.9 |
| Putative transcriptional repressor dica | SAMEA3752620_01547 | Not Available | Positive | 1659802 - 1660209 | 15511.7 |
| Hypothetical protein | SAMEA3752620_01548 | Not Available | Positive | 1660378 - 1660530 | 5510.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





