Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Cp4-57 prophage | SAMEA3472110_01218 | Not Available | Negative | 1284331 - 1285539 | 45346.4 |
| Tmrna,resume; | Not Available | Not Available | Positive | 1285724 - 1286086 | Not Available |
| Ssra-binding protein | SAMEA3472110_01220 | Not Available | Negative | 1286301 - 1286783 | 18270.1 |
| Attl | Not Available | Not Available | Positive | 1286784 - 1286795 | Not Available |
| Type ii toxin-antitoxin system toxin rata | SAMEA3472110_01221 | Not Available | Positive | 1286915 - 1287391 | 17727.7 |
| Rnfh family protein | SAMEA3472110_01222 | Not Available | Positive | 1287381 - 1287671 | 10761.0 |
| Outer membrane protein assembly factor bame | SAMEA3472110_01223 | Not Available | Negative | 1287733 - 1288074 | 12302.8 |
| Dna repair protein recn | SAMEA3472110_01224 | Not Available | Negative | 1288223 - 1289884 | 61392.1 |
| Dna repair protein recn | SAMEA3472110_01225 | Not Available | Negative | 1289970 - 1290848 | 32568.3 |
| Heat shock protein | SAMEA3472110_01226 | Not Available | Positive | 1290971 - 1291564 | 21813.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





