Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Helper derepression protein | SAMEA3472110_01206 | Not Available | Negative | 1277063 - 1277350 | 10965.1 |
| Putative ci repressor | SAMEA3472110_01207 | Not Available | Negative | 1277343 - 1277540 | 7322.97 |
| Transcriptional regulator | SAMEA3472110_01210 | Not Available | Negative | 1277894 - 1278160 | 9763.97 |
| Head size determination protein sid | SAMEA3472110_01211 | Not Available | Positive | 1278712 - 1279446 | 27236.3 |
| Transactivation protein | SAMEA3472110_01212 | Not Available | Positive | 1279443 - 1279943 | 19012.0 |
| Amber mutation-suppressing protein | SAMEA3472110_01213 | Not Available | Positive | 1280017 - 1280589 | 21339.2 |
| virulence factor | SAMEA3472110_01214 | Not Available | Negative | 1280956 - 1282875 | 74022.6 |
| uncharacterised protein | SAMEA3472110_01215 | Not Available | Negative | 1282868 - 1283359 | 19398.5 |
| uncharacterised protein | SAMEA3472110_01216 | Not Available | Negative | 1283359 - 1283940 | 22295.7 |
| uncharacterised protein | SAMEA3472110_01217 | Not Available | Negative | 1283927 - 1284289 | 13249.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





