Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna repair protein | SAMEA3472110_00780 | Not Available | Positive | 840709 - 841185 | 17683.4 |
| Hypothetical protein | SAMEA3472110_00781 | Not Available | Positive | 841272 - 841493 | 8455.26 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472110_00782 | Not Available | Positive | 841573 - 841941 | 13639.2 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472110_00783 | Not Available | Positive | 842031 - 842408 | 13931.8 |
| cp4-44 prophage | SAMEA3472110_00784 | Not Available | Positive | 842405 - 842827 | 15505.3 |
| Dna restriction methylase | SAMEA3472110_00785 | Not Available | Positive | 842912 - 843754 | 32578.3 |
| Attl | Not Available | Not Available | Positive | 1267944 - 1267955 | Not Available |
| Dna primase | SAMEA3472110_01203 | Not Available | Negative | 1273811 - 1276144 | 84775.0 |
| Hypothetical protein | SAMEA3472110_01204 | Not Available | Negative | 1276159 - 1276479 | 11802.6 |
| Hypothetical protein | SAMEA3472110_01205 | Not Available | Negative | 1276615 - 1277070 | 17727.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





