Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 4395097 - 4395172 | Not Available |
| Putative tellurite or colicin resistance protein | SAMEA3472110_04282 | Not Available | Positive | 4396100 - 4396525 | 15189.2 |
| Tcib | SAMEA3472110_04283 | Not Available | Positive | 4396525 - 4396689 | 5753.39 |
| Tcic | SAMEA3472110_04284 | Not Available | Positive | 4396689 - 4396796 | 3720.71 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 4396800 - 4396875 | Not Available |
| uncharacterised protein | SAMEA3472110_04286 | Not Available | Positive | 4397334 - 4397909 | 21632.0 |
| uncharacterised protein | SAMEA3472110_04287 | Not Available | Positive | 4397909 - 4398301 | 14756.8 |
| Late promoter activating protein | SAMEA3472110_04288 | Not Available | Positive | 4398410 - 4398802 | 15066.3 |
| Terminase a protein | SAMEA3472110_04289 | Not Available | Positive | 4398799 - 4400163 | 51050.6 |
| Putative large terminase protein | SAMEA3472110_04290 | Not Available | Positive | 4400163 - 4401671 | 57099.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





