Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_04270 | Not Available | Positive | 4382883 - 4383080 | 7429.86 |
| Hypothetical protein | SAMEA3472110_04271 | Not Available | Negative | 4383113 - 4383598 | 17593.0 |
| Darb | SAMEA3472110_04272 | Not Available | Positive | 4383750 - 4390586 | 252486.0 |
| Putative protein ulx | SAMEA3472110_04273 | Not Available | Positive | 4390623 - 4391057 | 16466.5 |
| uncharacterised protein | SAMEA3472110_04274 | Not Available | Positive | 4391060 - 4391320 | 10442.5 |
| Putative morphogenetic function protein | SAMEA3472110_04275 | Not Available | Positive | 4391727 - 4391951 | 8359.1 |
| uncharacterised protein | SAMEA3472110_04276 | Not Available | Positive | 4391966 - 4392166 | 7404.81 |
| uncharacterised protein | SAMEA3472110_04277 | Not Available | Positive | 4392163 - 4392462 | 11013.5 |
| Hypothetical protein | SAMEA3472110_04278 | Not Available | Positive | 4392576 - 4393784 | 45974.4 |
| Trna,type:asn,anti_codon:gtt; | Not Available | Not Available | Positive | 4395019 - 4395094 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





