Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative prophage protein | SAMEA3472110_00417 | Not Available | Positive | 443762 - 443959 | 7256.72 |
| uncharacterised protein | SAMEA3472110_00418 | Not Available | Positive | 443952 - 444179 | 8410.18 |
| putative prophage protein | SAMEA3472110_00419 | Not Available | Positive | 444185 - 444484 | 11328.8 |
| Dnab-like helicase | SAMEA3472110_00420 | Not Available | Positive | 444481 - 445887 | 51707.9 |
| uncharacterised protein | SAMEA3472110_00421 | Not Available | Positive | 445904 - 446092 | 6935.33 |
| putative prophage protein | SAMEA3472110_00422 | Not Available | Positive | 446089 - 446340 | 9104.88 |
| Single-stranded dna-binding protein ssb | SAMEA3472110_00423 | Not Available | Positive | 446337 - 446762 | 14915.6 |
| Attr | Not Available | Not Available | Positive | 446817 - 446829 | Not Available |
| Hypothetical protein | SAMEA3472110_00778 | Not Available | Positive | 839301 - 840119 | 31337.5 |
| Hypothetical protein | SAMEA3472110_00779 | Not Available | Positive | 840211 - 840693 | 18091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





