Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage head-to-tail joining protein | SAMEA3472110_03501 | Not Available | Positive | 3636934 - 3637167 | 8586.33 |
| Capsid component | SAMEA3472110_03502 | Not Available | Positive | 3637164 - 3638738 | 58332.5 |
| Capsid component | SAMEA3472110_03503 | Not Available | Positive | 3638738 - 3640045 | 45952.5 |
| Head decoration protein | SAMEA3472110_03504 | Not Available | Positive | 3640045 - 3640374 | 11374.4 |
| Capsid component | SAMEA3472110_03505 | Not Available | Positive | 3640434 - 3641468 | 38528.6 |
| Dna packaging protein fi | SAMEA3472110_03506 | Not Available | Positive | 3641503 - 3641916 | 14719.9 |
| uncharacterised protein | SAMEA3472110_03507 | Not Available | Positive | 3641913 - 3642293 | 13994.3 |
| Putative minor tail protein z | SAMEA3472110_03508 | Not Available | Positive | 3642324 - 3643004 | 25582.1 |
| uncharacterised protein | SAMEA3472110_03509 | Not Available | Positive | 3643001 - 3643537 | 19407.8 |
| Phage baseplate assembly protein v | SAMEA3472110_03510 | Not Available | Positive | 3643518 - 3644420 | 31810.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





