Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail fiber assembly protein | SAMEA3472110_02313 | Not Available | Negative | 2371800 - 2372402 | 21939.4 |
| Tail fiber protein | SAMEA3472110_02314 | Not Available | Negative | 2372402 - 2373184 | 28009.9 |
| Tail protein | SAMEA3472110_02315 | Not Available | Negative | 2373208 - 2373774 | 20572.4 |
| Tail protein | SAMEA3472110_02316 | Not Available | Negative | 2373765 - 2374823 | 38252.2 |
| Tail protein | SAMEA3472110_02317 | Not Available | Negative | 2374810 - 2375235 | 16287.4 |
| Tail protein | SAMEA3472110_02318 | Not Available | Negative | 2375235 - 2375783 | 19568.2 |
| Tail protein | SAMEA3472110_02319 | Not Available | Negative | 2375783 - 2376862 | 39282.1 |
| Tail/dna circulation protein | SAMEA3472110_02320 | Not Available | Negative | 2376859 - 2378187 | 47953.7 |
| trna_anti-like | SAMEA3472110_02321 | Not Available | Positive | 2378298 - 2378744 | 16618.9 |
| Tail protein | SAMEA3472110_02322 | Not Available | Negative | 2378776 - 2380608 | 65396.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





