Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine-guanine phosphoribosyltransferase | SAMEA3472110_02188 | Not Available | Positive | 2230532 - 2231068 | 20128.5 |
| carbonic anhydrase 2 yadf | SAMEA3472110_02189 | Not Available | Negative | 2231109 - 2231771 | 25098.2 |
| Abc transporter | SAMEA3472110_02190 | Not Available | Positive | 2231880 - 2232806 | 34649.2 |
| Attr | Not Available | Not Available | Positive | 2240733 - 2240744 | Not Available |
| Lysr family transcriptional regulator | SAMEA3472110_02307 | Not Available | Positive | 2365902 - 2366786 | 33374.4 |
| predicted lipase | SAMEA3472110_02308 | Not Available | Positive | 2368156 - 2369172 | 38125.6 |
| Hypothetical protein | SAMEA3472110_02309 | Not Available | Positive | 2369581 - 2370354 | 29072.6 |
| Dna-invertase | SAMEA3472110_02310 | Not Available | Negative | 2370415 - 2370969 | 20614.2 |
| Tail protein | SAMEA3472110_02311 | Not Available | Positive | 2370999 - 2371394 | 13892.5 |
| Tail fiber assembly protein | SAMEA3472110_02312 | Not Available | Positive | 2371397 - 2371828 | 15978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





