Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin protein | SAMEA3472110_02061 | Not Available | Positive | 2110254 - 2110460 | 7394.97 |
| Hypothetical protein | SAMEA3472110_02062 | Not Available | Positive | 2110465 - 2110854 | 14558.7 |
| Endolysin | SAMEA3472110_02063 | Not Available | Positive | 2110889 - 2111305 | 15566.7 |
| Phage-tail assembly-like protein | SAMEA3472110_02064 | Not Available | Positive | 2111302 - 2111799 | 18310.8 |
| gnsa/gnsb family transcriptional regulator | SAMEA3472110_02066 | Not Available | Positive | 2113048 - 2113221 | 6548.04 |
| Putative envelope protein | SAMEA3472110_02067 | Not Available | Negative | 2113373 - 2113783 | 16497.8 |
| Hypothetical protein | SAMEA3472110_02068 | Not Available | Negative | 2113841 - 2114074 | 9023.82 |
| Dna packaging protein | SAMEA3472110_02069 | Not Available | Positive | 2114463 - 2115008 | 20470.3 |
| Putative atp-dependent protease | SAMEA3472110_02167 | Not Available | Positive | 2215595 - 2215774 | 6222.72 |
| Attl | Not Available | Not Available | Positive | 2215669 - 2215680 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





