Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 1964964 - 1964977 | Not Available |
| Attl | Not Available | Not Available | Positive | 2076956 - 2076967 | Not Available |
| Zinc-containing alcohol dehydrogenase superfamily protein | SAMEA3472110_02033 | Not Available | Positive | 2090379 - 2091398 | 36564.3 |
| protein, truncated | SAMEA3472110_02034 | Not Available | Positive | 2091456 - 2091584 | 4863.84 |
| Putative integrase | SAMEA3472110_02035 | Not Available | Negative | 2091586 - 2092866 | 48356.2 |
| Bacteriophage excisionase | SAMEA3472110_02036 | Not Available | Negative | 2092901 - 2093137 | 9143.04 |
| Endodeoxyribonuclease | SAMEA3472110_02037 | Not Available | Negative | 2093225 - 2095696 | 92720.5 |
| putative prophage protein | SAMEA3472110_02038 | Not Available | Negative | 2095790 - 2095981 | 6830.24 |
| division inhibition protein | SAMEA3472110_02039 | Not Available | Negative | 2095978 - 2096166 | 6994.73 |
| Attr | Not Available | Not Available | Positive | 2096281 - 2096292 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





