Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein i | SAMEA3472110_01278 | Not Available | Positive | 1326394 - 1326924 | 19932.7 |
| Tail fiber | SAMEA3472110_01279 | Not Available | Positive | 1326927 - 1329518 | 91481.3 |
| Tail fiber assembly protein | SAMEA3472110_01280 | Not Available | Positive | 1329521 - 1330054 | 20671.4 |
| Tail protein | SAMEA3472110_01281 | Not Available | Negative | 1330123 - 1330611 | 18407.0 |
| Tail tape measure protein | SAMEA3472110_01282 | Not Available | Negative | 1330624 - 1333431 | 99908.9 |
| Tail protein | SAMEA3472110_01283 | Not Available | Negative | 1333582 - 1333947 | 13150.7 |
| Major tail tube protein | SAMEA3472110_01284 | Not Available | Negative | 1334002 - 1334514 | 18893.6 |
| Tail sheath family protein | SAMEA3472110_01285 | Not Available | Negative | 1334514 - 1335698 | 43622.6 |
| Bacteriop2 gpd protein | SAMEA3472110_01286 | Not Available | Positive | 1335856 - 1336965 | 41224.9 |
| Ogr/delta-like zinc finger family protein | SAMEA3472110_01287 | Not Available | Positive | 1337008 - 1337268 | 9678.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





