Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head completion/stabilization protein | SAMEA3472110_01268 | Not Available | Positive | 1321530 - 1322024 | 18500.7 |
| Tail protein x | SAMEA3472110_01269 | Not Available | Positive | 1322024 - 1322224 | 7465.94 |
| Holin family protein | SAMEA3472110_01270 | Not Available | Positive | 1322227 - 1322550 | 11304.8 |
| M15 family metallopeptidase | SAMEA3472110_01271 | Not Available | Positive | 1322547 - 1322939 | 14688.4 |
| Duf2570 domain-containing protein | SAMEA3472110_01272 | Not Available | Positive | 1322936 - 1323343 | 14948.6 |
| Tail completion protein | SAMEA3472110_01273 | Not Available | Positive | 1323481 - 1323948 | 17765.9 |
| Tail protein | SAMEA3472110_01274 | Not Available | Positive | 1323932 - 1324576 | 25019.8 |
| Baseplate assembly protein v | SAMEA3472110_01275 | Not Available | Positive | 1324573 - 1325154 | 20134.9 |
| Lysozyme family baseplate assembly protein | SAMEA3472110_01276 | Not Available | Positive | 1325151 - 1325501 | 12893.7 |
| Baseplate assembly protein j | SAMEA3472110_01277 | Not Available | Positive | 1325505 - 1326401 | 31907.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





