Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine radical enzyme, yjji family | SAMEA3472110_00260 | Not Available | Negative | 265973 - 267523 | 58065.4 |
| deoxyribose-phosphate aldolase | SAMEA3472110_00261 | Not Available | Positive | 267781 - 268560 | 27721.3 |
| thymidine phosphorylase | SAMEA3472110_00262 | Not Available | Positive | 268638 - 269960 | 47182.9 |
| phosphopentomutase | SAMEA3472110_00263 | Not Available | Positive | 270012 - 271235 | 44372.4 |
| purine nucleoside phosphorylase | SAMEA3472110_00264 | Not Available | Positive | 271292 - 272011 | 25951.4 |
| putative transcriptional regulator | SAMEA3472110_00265 | Not Available | Negative | 272172 - 272435 | 9901.29 |
| lipoate-protein ligase a | SAMEA3472110_00266 | Not Available | Negative | 272467 - 273483 | 37997.9 |
| smp protein precursor | SAMEA3472110_00267 | Not Available | Negative | 273511 - 274155 | 24084.2 |
| phosphoserine phosphatase serb | SAMEA3472110_00268 | Not Available | Positive | 274261 - 275229 | 35044.8 |
| dna repair protein rada | SAMEA3472110_00269 | Not Available | Positive | 275278 - 276660 | 49473.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





