Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail domain-containing protein | SAMEA3472110_00249 | Not Available | Positive | 255752 - 256981 | 43214.6 |
| putative retron-type reverse transcriptase | SAMEA3472110_00251 | Not Available | Negative | 257678 - 259048 | 52466.8 |
| uncharacterised protein | SAMEA3472110_00252 | Not Available | Negative | 259026 - 259577 | 21653.7 |
| dna damage-inducible protein | SAMEA3472110_00253 | Not Available | Negative | 259943 - 260041 | 3636.53 |
| peptide chain release factor 3 | SAMEA3472110_00254 | Not Available | Positive | 260261 - 261847 | 59331.2 |
| periplasmic protein | SAMEA3472110_00255 | Not Available | Positive | 262240 - 262845 | 21074.8 |
| protein | SAMEA3472110_00256 | Not Available | Positive | 262972 - 263133 | 5536.27 |
| patatin-like phospholipase | SAMEA3472110_00257 | Not Available | Positive | 263255 - 264328 | 39850.1 |
| putative deoxyribonuclease | SAMEA3472110_00258 | Not Available | Positive | 264325 - 265104 | 28828.6 |
| radical sam superfamily protein | SAMEA3472110_00259 | Not Available | Negative | 265138 - 265842 | 25732.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





