Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3472110_00239 | Not Available | Negative | 244656 - 245537 | 32725.7 |
| inner membrane protein | SAMEA3472110_00240 | Not Available | Positive | 245636 - 246685 | 36884.3 |
| endonuclease iv | SAMEA3472110_00241 | Not Available | Positive | 246759 - 247616 | 31463.2 |
| putative pyrimidine kinase | SAMEA3472110_00242 | Not Available | Positive | 247619 - 248707 | 39661.5 |
| putative nucleoside transporter | SAMEA3472110_00243 | Not Available | Negative | 248763 - 250013 | 43398.2 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | SAMEA3472110_00244 | Not Available | Negative | 250113 - 251054 | 33809.1 |
| dna-binding transcriptional activator yeil | SAMEA3472110_00245 | Not Available | Positive | 251184 - 251882 | 26828.6 |
| putative nucleoside transporter | SAMEA3472110_00246 | Not Available | Negative | 251950 - 253200 | 43374.3 |
| indigoidine synthase a like protein | SAMEA3472110_00247 | Not Available | Negative | 253294 - 254232 | 32934.9 |
| putative pyrimidine kinase | SAMEA3472110_00248 | Not Available | Negative | 254220 - 255161 | 33674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





