Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family membrane protein | SAMEA3472110_00219 | Not Available | Positive | 221984 - 222562 | 21422.9 |
| putative short-chain dehydrogenase | SAMEA3472110_00220 | Not Available | Negative | 222692 - 223453 | 26951.4 |
| multidrug resistance outer membrane protein mdtq | SAMEA3472110_00221 | Not Available | Negative | 223506 - 224942 | 52162.9 |
| pp_00201 | SAMEA3472110_00222 | Not Available | Negative | 225622 - 226569 | Not Available |
| putative effector of murein hydrolase lrga | SAMEA3472110_00223 | Not Available | Positive | 226808 - 227206 | 14579.6 |
| membrane protein lrgb-like family | SAMEA3472110_00224 | Not Available | Positive | 227203 - 227898 | 24531.1 |
| cytidine deaminase | SAMEA3472110_00225 | Not Available | Positive | 228028 - 228912 | 31568.6 |
| vancomycin sensitivity sana protein | SAMEA3472110_00226 | Not Available | Positive | 229062 - 229781 | 27288.5 |
| inner membrane protein | SAMEA3472110_00227 | Not Available | Positive | 229784 - 230023 | 9294.64 |
| putative oxidoreductase | SAMEA3472110_00228 | Not Available | Positive | 230217 - 231455 | 44254.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





