Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | SAMEA3472110_00209 | Not Available | Positive | 211110 - 211841 | 28056.8 |
| putative inner membrane protein | SAMEA3472110_00210 | Not Available | Positive | 211901 - 212008 | 3642.85 |
| abc transporter permease | SAMEA3472110_00211 | Not Available | Negative | 211989 - 212720 | 25586.2 |
| abc transporter atp-binding protein | SAMEA3472110_00212 | Not Available | Negative | 212725 - 213651 | 34400.7 |
| abc transporter permease | SAMEA3472110_00213 | Not Available | Negative | 213644 - 214801 | 41210.3 |
| abc transporter substrate-binding protein | SAMEA3472110_00214 | Not Available | Negative | 214808 - 215725 | 32486.9 |
| periplasmic beta-glucosidase | SAMEA3472110_00215 | Not Available | Negative | 215874 - 218141 | 82465.4 |
| d-lactate dehydrogenase | SAMEA3472110_00216 | Not Available | Positive | 218367 - 220082 | 64679.0 |
| penicillin-binding protein 7 | SAMEA3472110_00217 | Not Available | Negative | 220121 - 221053 | 33889.4 |
| inner membrane protein | SAMEA3472110_00218 | Not Available | Negative | 221227 - 221814 | 21692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





