Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative polysaccharide export protein | SAMEA3472110_00142 | Not Available | Negative | 134173 - 135312 | 41912.4 |
| transporter | SAMEA3472110_00144 | Not Available | Positive | 135970 - 137553 | 59453.9 |
| putative outer membrane assembly protein | SAMEA3472110_00145 | Not Available | Negative | 137846 - 139699 | 68892.8 |
| 2'-deoxycytidine 5'-triphosphate deaminase | SAMEA3472110_00146 | Not Available | Negative | 139721 - 140302 | 21252.4 |
| uridine kinase | SAMEA3472110_00147 | Not Available | Negative | 140394 - 141035 | 24354.6 |
| sensor protein | SAMEA3472110_00148 | Not Available | Positive | 141353 - 144670 | 123935.0 |
| 3-methyladenine dna glycosylase | SAMEA3472110_00149 | Not Available | Negative | 144708 - 145565 | 31548.1 |
| chaperone | SAMEA3472110_00150 | Not Available | Positive | 145699 - 147051 | 49351.2 |
| putative chaperonin | SAMEA3472110_00151 | Not Available | Negative | 147064 - 149004 | 71257.3 |
| protein | SAMEA3472110_00152 | Not Available | Negative | 149001 - 149681 | 24425.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





