Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-l-fucose synthetase | SAMEA3472110_00132 | Not Available | Negative | 124286 - 125251 | 36171.2 |
| gdp-mannose 4,6-dehydratase | SAMEA3472110_00133 | Not Available | Negative | 125254 - 126375 | 42049.2 |
| colanic acid biosynthesis acetyltransferase wcaf | SAMEA3472110_00134 | Not Available | Negative | 126402 - 126950 | 19976.2 |
| glycosyl transferase family protein | SAMEA3472110_00135 | Not Available | Negative | 126966 - 127712 | 27846.4 |
| colanic acid biosynthesis protein | SAMEA3472110_00136 | Not Available | Negative | 127723 - 128940 | 45377.1 |
| putative glycosyltransferase | SAMEA3472110_00137 | Not Available | Negative | 128915 - 130132 | 45259.6 |
| putative acetyltransferase | SAMEA3472110_00138 | Not Available | Negative | 130129 - 130617 | 17615.6 |
| putative glycosyl transferase | SAMEA3472110_00139 | Not Available | Negative | 130620 - 131459 | 33006.4 |
| tyrosine kinase | SAMEA3472110_00140 | Not Available | Negative | 131559 - 133721 | 79299.6 |
| protein-tyrosine-phosphatase | SAMEA3472110_00141 | Not Available | Negative | 133724 - 134167 | 16710.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





