Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate aminotransferase | SAMEA3472110_00101 | Not Available | Positive | 90585 - 91655 | 39392.4 |
| imidazole glycerol-phosphate dehydratase/histidinol phosphatase | SAMEA3472110_00102 | Not Available | Positive | 91655 - 92722 | 40236.3 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472110_00103 | Not Available | Positive | 92722 - 93312 | 21644.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMEA3472110_00104 | Not Available | Positive | 93312 - 94049 | 26070.2 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472110_00105 | Not Available | Positive | 94031 - 94807 | 28457.0 |
| histidine biosynthesis bifunctional protein | SAMEA3472110_00106 | Not Available | Positive | 94801 - 95412 | 22819.1 |
| o-antigen chain length determinant wzz | SAMEA3472110_00107 | Not Available | Negative | 95509 - 96489 | 36272.7 |
| udp-glucose 6-dehydrogenase | SAMEA3472110_00108 | Not Available | Negative | 96636 - 97802 | 43615.2 |
| 6-phosphogluconate dehydrogenase | SAMEA3472110_00109 | Not Available | Negative | 98050 - 99456 | 51454.1 |
| lipid a core - o-antigen ligase and related enzymes | SAMEA3472110_00110 | Not Available | Negative | 99576 - 100787 | 46190.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





