Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3472110_00079 | Not Available | Negative | 70550 - 71428 | 33054.7 |
| nitrogen assimilation regulatory protein nac | SAMEA3472110_00080 | Not Available | Negative | 71602 - 72519 | 32841.0 |
| Trna-asn | Not Available | Not Available | Positive | 72845 - 72920 | Not Available |
| erfk/ybis/ycfs/ynhg family protein | SAMEA3472110_00082 | Not Available | Negative | 72976 - 73911 | 34551.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3472110_00083 | Not Available | Negative | 73973 - 75052 | 37003.4 |
| cobalamin synthase | SAMEA3472110_00084 | Not Available | Negative | 75064 - 75807 | 26397.4 |
| bifunctional adenosylcobalamin biosynthesis protein | SAMEA3472110_00085 | Not Available | Negative | 75804 - 76346 | 20011.1 |
| putative alpha helix protein | SAMEA3472110_00086 | Not Available | Negative | 77218 - 77547 | 12778.5 |
| inner membrane protein | SAMEA3472110_00087 | Not Available | Negative | 77719 - 78777 | 39957.7 |
| dna gyrase inhibitory protein | SAMEA3472110_00088 | Not Available | Negative | 78975 - 79448 | 18062.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





