Escherichia coli strain VREC0288

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain VREC0288 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is typically found in a host-associated habitat and is mesophilic, with an optimal growth temperature of 37°C. It possesses a unique cellular organization, appearing in pairs and singles, and has a single replicon and a double membrane structure. VREC0288 has a diverse range of hosts, including Homo sapiens, various livestock such as Gallus gallus and Bos taurus, and other species across multiple taxonomic groups such as Metazoa, Aves, and Mammalia. This broad host range highlights its ecological versatility and ability to adapt to different biological environments. The strain is associated with numerous health effects, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as septicemia and hemolytic uremic syndrome (HUS). Additionally, it can cause neonatal meningitis and contribute to various forms of colibacillosis and gastrointestinal diseases in other hosts. Given its pathogenicity, particularly in human health, E. coli strain VREC0288 serves as an important model for understanding enteric pathogens and their impact on both animal and human health. Its ability to thrive in multiple hosts emphasizes the interconnectedness of host-pathogen dynamics and the potential for zoonotic transmission of infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain VREC0288

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain VREC0288
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain VREC0288


Gene Summary

Adenine Count

1477659 bp

Thymine Count

1466531 bp

Guanine Count

1487187 bp

Cytosine Count

1489797 bp

Genome Length

5922648 bp

Protein-coding Genes

5107 genes

Non-Coding Genes

672 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar motor switch protein flimSAMEA3472110_00038Not AvailablePositive30568 - 3157237865.5
flagellar motor switch protein flinSAMEA3472110_00039Not AvailablePositive31569 - 3198214811.7
flagellar biosynthesis protein flioSAMEA3472110_00040Not AvailablePositive31985 - 3235012670.6
flagellar biosynthetic protein flipSAMEA3472110_00041Not AvailablePositive32350 - 3308726916.1
flagellar biosynthesis protein fliqSAMEA3472110_00042Not AvailablePositive33097 - 333669632.54
flagellar biosynthesis protein flirSAMEA3472110_00043Not AvailablePositive33375 - 3416028503.3
colanic acid capsullar biosynthesis activation protein aSAMEA3472110_00044Not AvailablePositive34450 - 3507323517.8
dsrb proteinSAMEA3472110_00045Not AvailableNegative35117 - 353056946.22
protein of uncharacterised function (duf2525)SAMEA3472110_00046Not AvailablePositive35468 - 356958579.66
mannosyl-3-phosphoglycerate phosphataseSAMEA3472110_00048Not AvailablePositive35993 - 3680830477.0

Displaying genes 771 – 780 of 5779 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total