Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flim | SAMEA3472110_00038 | Not Available | Positive | 30568 - 31572 | 37865.5 |
| flagellar motor switch protein flin | SAMEA3472110_00039 | Not Available | Positive | 31569 - 31982 | 14811.7 |
| flagellar biosynthesis protein flio | SAMEA3472110_00040 | Not Available | Positive | 31985 - 32350 | 12670.6 |
| flagellar biosynthetic protein flip | SAMEA3472110_00041 | Not Available | Positive | 32350 - 33087 | 26916.1 |
| flagellar biosynthesis protein fliq | SAMEA3472110_00042 | Not Available | Positive | 33097 - 33366 | 9632.54 |
| flagellar biosynthesis protein flir | SAMEA3472110_00043 | Not Available | Positive | 33375 - 34160 | 28503.3 |
| colanic acid capsullar biosynthesis activation protein a | SAMEA3472110_00044 | Not Available | Positive | 34450 - 35073 | 23517.8 |
| dsrb protein | SAMEA3472110_00045 | Not Available | Negative | 35117 - 35305 | 6946.22 |
| protein of uncharacterised function (duf2525) | SAMEA3472110_00046 | Not Available | Positive | 35468 - 35695 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase | SAMEA3472110_00048 | Not Available | Positive | 35993 - 36808 | 30477.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





