Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Antitermination protein q | SAMEA3472110_05858 | Not Available | Negative | 5828946 - 5829329 | 14173.3 |
| Hypothetical protein | SAMEA3472110_05859 | Not Available | Negative | 5829347 - 5829679 | 12549.2 |
| Phage protein | SAMEA3472110_05894 | Not Available | Negative | 5863143 - 5863439 | 10976.1 |
| rac prophage | SAMEA3472110_05895 | Not Available | Positive | 5863563 - 5864039 | 17664.0 |
| Hypothetical protein | SAMEA3472110_05896 | Not Available | Positive | 5864277 - 5864510 | 8357.68 |
| putative prophage protein | SAMEA3472110_05897 | Not Available | Positive | 5864512 - 5864640 | 4688.29 |
| putative prophage protein | SAMEA3472110_05898 | Not Available | Positive | 5864670 - 5864888 | 8364.01 |
| Hypothetical protein | SAMEA3472110_05899 | Not Available | Negative | 5865024 - 5865479 | 17081.8 |
| regulator of cell division encoded by prophage | SAMEA3472110_05901 | Not Available | Positive | 5866025 - 5866207 | 6914.56 |
| phage protein | SAMEA3472110_05902 | Not Available | Positive | 5866210 - 5866413 | 7216.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





