Escherichia coli strain VREC0288

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain VREC0288 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is typically found in a host-associated habitat and is mesophilic, with an optimal growth temperature of 37°C. It possesses a unique cellular organization, appearing in pairs and singles, and has a single replicon and a double membrane structure. VREC0288 has a diverse range of hosts, including Homo sapiens, various livestock such as Gallus gallus and Bos taurus, and other species across multiple taxonomic groups such as Metazoa, Aves, and Mammalia. This broad host range highlights its ecological versatility and ability to adapt to different biological environments. The strain is associated with numerous health effects, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as septicemia and hemolytic uremic syndrome (HUS). Additionally, it can cause neonatal meningitis and contribute to various forms of colibacillosis and gastrointestinal diseases in other hosts. Given its pathogenicity, particularly in human health, E. coli strain VREC0288 serves as an important model for understanding enteric pathogens and their impact on both animal and human health. Its ability to thrive in multiple hosts emphasizes the interconnectedness of host-pathogen dynamics and the potential for zoonotic transmission of infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain VREC0288

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain VREC0288
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain VREC0288


Gene Summary

Adenine Count

1477659 bp

Thymine Count

1466531 bp

Guanine Count

1487187 bp

Cytosine Count

1489797 bp

Genome Length

5922648 bp

Protein-coding Genes

5107 genes

Non-Coding Genes

672 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative baseplate structural proteinSAMEA3472110_05653Not AvailablePositive5644045 - 564547553434.3
Putative tail tube structural protein gp16SAMEA3472110_05654Not AvailablePositive5645486 - 564633132285.4
Tail fiber protein rSAMEA3472110_05655Not AvailablePositive5646426 - 564687216529.7
Tail fibrer protein gpsSAMEA3472110_05656Not AvailablePositive5646875 - 5650285118565.0
Tail fiber assembly proteinSAMEA3472110_05657Not AvailablePositive5650288 - 565082120658.4
Tail fiber assemblySAMEA3472110_05658Not AvailableNegative5650850 - 565138020393.8
Tail fiber protein scSAMEA3472110_05659Not AvailableNegative5651381 - 565192019873.3
Host specificity proteinSAMEA3472110_05681Not AvailableNegative5676692 - 5680090124447.0
Tail assembly proteinSAMEA3472110_05682Not AvailableNegative5680151 - 568069918877.7
Tail fiber componentSAMEA3472110_05683Not AvailableNegative5680696 - 568143928289.3

Displaying genes 691 – 700 of 5779 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total