Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative baseplate structural protein | SAMEA3472110_05653 | Not Available | Positive | 5644045 - 5645475 | 53434.3 |
| Putative tail tube structural protein gp16 | SAMEA3472110_05654 | Not Available | Positive | 5645486 - 5646331 | 32285.4 |
| Tail fiber protein r | SAMEA3472110_05655 | Not Available | Positive | 5646426 - 5646872 | 16529.7 |
| Tail fibrer protein gps | SAMEA3472110_05656 | Not Available | Positive | 5646875 - 5650285 | 118565.0 |
| Tail fiber assembly protein | SAMEA3472110_05657 | Not Available | Positive | 5650288 - 5650821 | 20658.4 |
| Tail fiber assembly | SAMEA3472110_05658 | Not Available | Negative | 5650850 - 5651380 | 20393.8 |
| Tail fiber protein sc | SAMEA3472110_05659 | Not Available | Negative | 5651381 - 5651920 | 19873.3 |
| Host specificity protein | SAMEA3472110_05681 | Not Available | Negative | 5676692 - 5680090 | 124447.0 |
| Tail assembly protein | SAMEA3472110_05682 | Not Available | Negative | 5680151 - 5680699 | 18877.7 |
| Tail fiber component | SAMEA3472110_05683 | Not Available | Negative | 5680696 - 5681439 | 28289.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





