Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative morphogenetic protein pmgg | SAMEA3472110_05640 | Not Available | Positive | 5632988 - 5633584 | 21208.2 |
| Putative baseplate structural protein, bplb | SAMEA3472110_05641 | Not Available | Positive | 5633593 - 5634084 | 18066.5 |
| Pmgc | SAMEA3472110_05642 | Not Available | Positive | 5634139 - 5634690 | 20903.2 |
| Major tail tube protein tubb | SAMEA3472110_05643 | Not Available | Positive | 5634706 - 5635413 | 25736.5 |
| Hypothetical protein | SAMEA3472110_05644 | Not Available | Negative | 5635444 - 5636385 | 35420.8 |
| Icd | SAMEA3472110_05645 | Not Available | Negative | 5636385 - 5636600 | 8231.91 |
| Gp37 | SAMEA3472110_05648 | Not Available | Negative | 5637360 - 5638115 | 28877.5 |
| Pmgb | SAMEA3472110_05649 | Not Available | Positive | 5638504 - 5639325 | 30909.7 |
| Transglycosylase slt domain protein | SAMEA3472110_05651 | Not Available | Positive | 5640030 - 5643668 | 127036.0 |
| Pmga | SAMEA3472110_05652 | Not Available | Positive | 5643674 - 5644048 | 13613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





