Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative holin | SAMEA3472110_05316 | Not Available | Positive | 5334028 - 5334306 | 10616.7 |
| Endolysin | SAMEA3472110_05317 | Not Available | Positive | 5334308 - 5334853 | 20574.4 |
| uncharacterised protein | SAMEA3472110_05318 | Not Available | Positive | 5335050 - 5335196 | 5088.5 |
| uncharacterised protein | SAMEA3472110_05319 | Not Available | Positive | 5335380 - 5335535 | 5641.01 |
| Hypothetical protein | SAMEA3472110_05320 | Not Available | Positive | 5335623 - 5335832 | 7603.14 |
| Orf076 | SAMEA3472110_05321 | Not Available | Positive | 5335956 - 5336171 | 8007.16 |
| Dna packaging protein | SAMEA3472110_05322 | Not Available | Positive | 5336807 - 5337352 | 20485.3 |
| Dna packaging protein | SAMEA3472110_05323 | Not Available | Positive | 5337327 - 5339252 | 73261.5 |
| Head-tail joining protein | SAMEA3472110_05324 | Not Available | Positive | 5339249 - 5339455 | 7613.19 |
| Capsid component | SAMEA3472110_05325 | Not Available | Positive | 5339452 - 5341053 | 59454.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





