Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472110_05169 | Not Available | Negative | 5201898 - 5202002 | 4114.85 |
| Hypothetical protein | SAMEA3472110_05170 | Not Available | Negative | 5202004 - 5202177 | 6767.54 |
| Lygf | SAMEA3472110_05171 | Not Available | Negative | 5202681 - 5203103 | 16195.6 |
| Primosomal protein i | SAMEA3472110_05172 | Not Available | Negative | 5203144 - 5204010 | 32116.0 |
| Hypothetical protein | SAMEA3472110_05300 | Not Available | Positive | 5324611 - 5324967 | 14092.9 |
| Hypothetical protein | SAMEA3472110_05301 | Not Available | Positive | 5325018 - 5325230 | 8312.45 |
| Putative sugar acetyl transferase inhibitor | SAMEA3472110_05302 | Not Available | Positive | 5325263 - 5325481 | 8614.84 |
| Putative hnh endonuclease | SAMEA3472110_05303 | Not Available | Positive | 5325483 - 5325848 | 13871.8 |
| Hypothetical protein | SAMEA3472110_05304 | Not Available | Positive | 5325845 - 5326189 | 13036.0 |
| Toxin-antitoxin system, putative toxin component | SAMEA3472110_05305 | Not Available | Negative | 5326394 - 5326693 | 11462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





