Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_05158 | Not Available | Positive | 5195032 - 5195286 | 9242.01 |
| Trna,type:gly,anti_codon:tcc; | Not Available | Not Available | Positive | 5195576 - 5195650 | Not Available |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 5195654 - 5195729 | Not Available |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 5195810 - 5195885 | Not Available |
| envelope protein encoded within prophage cp-933n | SAMEA3472110_05162 | Not Available | Negative | 5195912 - 5196499 | 22055.9 |
| Bacteriophage antiterminator protein q | SAMEA3472110_05163 | Not Available | Negative | 5197151 - 5197819 | 25523.6 |
| Crossover junction endodeoxyribonuclease rusa | SAMEA3472110_05164 | Not Available | Negative | 5197816 - 5198181 | 13909.0 |
| Hypothetical protein | SAMEA3472110_05165 | Not Available | Negative | 5198182 - 5199237 | 39597.0 |
| Putative protein kinase | SAMEA3472110_05167 | Not Available | Positive | 5200250 - 5201044 | 30592.4 |
| Putative serine/threonine phosphatase | SAMEA3472110_05168 | Not Available | Positive | 5201028 - 5201744 | 27105.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





