Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein conserved in bacteria, putative lipoprotein | SAMEA3472110_05917 | Not Available | Negative | 5876071 - 5876817 | 28319.2 |
| putative antirepressor | SAMEA3472110_05919 | Not Available | Positive | 5877150 - 5877719 | 21392.8 |
| uncharacterised protein | SAMEA3472110_05920 | Not Available | Negative | 5877695 - 5878042 | 12868.1 |
| putative bacteriophage protein | SAMEA3472110_05921 | Not Available | Negative | 5878046 - 5878210 | 5807.32 |
| protein involved in detoxification of methylglyoxal | SAMEA3472110_05922 | Not Available | Positive | 5878510 - 5880816 | 86359.9 |
| phosphatidylglycerophosphate synthase | SAMEA3472110_05923 | Not Available | Positive | 5880987 - 5881592 | 22563.5 |
| putative phosphatidate cytidylyltransferase | SAMEA3472110_05924 | Not Available | Positive | 5881592 - 5881723 | 5101.49 |
| protein | SAMEA3472110_05926 | Not Available | Negative | 5881973 - 5882137 | 5921.0 |
| pirin-related protein | SAMEA3472110_05927 | Not Available | Negative | 5882160 - 5882861 | 25964.0 |
| lysr family transcriptional regulator | SAMEA3472110_05928 | Not Available | Positive | 5882966 - 5883862 | 33231.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





