Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_05907 | Not Available | Negative | 5867956 - 5868279 | 12228.8 |
| toxin of the rele-relb toxin-antitoxin system | SAMEA3472110_05908 | Not Available | Negative | 5868425 - 5868706 | 11006.5 |
| putative antitoxin of toxin-antitoxin system | SAMEA3472110_05909 | Not Available | Negative | 5868696 - 5868947 | 9194.91 |
| pi protein (replication initiation protein) | SAMEA3472110_05910 | Not Available | Positive | 5870181 - 5871017 | 32227.7 |
| uncharacterised protein | SAMEA3472110_05911 | Not Available | Positive | 5871057 - 5871263 | 8195.2 |
| putative transposase | SAMEA3472110_05912 | Not Available | Positive | 5871485 - 5871925 | 17165.4 |
| transposition protein | SAMEA3472110_05913 | Not Available | Positive | 5871928 - 5872920 | 36928.1 |
| putative acetyltransferase | SAMEA3472110_05914 | Not Available | Negative | 5872889 - 5873389 | 18311.7 |
| dihydropteroate synthase type-1 | SAMEA3472110_05915 | Not Available | Negative | 5873517 - 5874356 | 30128.0 |
| putative ethidium bromide resistance protein | SAMEA3472110_05916 | Not Available | Negative | 5874350 - 5874697 | 12332.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





