Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_05874 | Not Available | Negative | 5843730 - 5844014 | 9529.3 |
| plasmid segregation protein | SAMEA3472110_05875 | Not Available | Positive | 5844281 - 5845237 | 35045.6 |
| stable plasmid inheritance protein | SAMEA3472110_05876 | Not Available | Positive | 5845251 - 5845589 | 12228.8 |
| putative crown gall tumor protein virc1 | SAMEA3472110_05877 | Not Available | Positive | 5845877 - 5846518 | 23498.4 |
| uncharacterised protein | SAMEA3472110_05878 | Not Available | Positive | 5846511 - 5846798 | 10993.2 |
| glutaminyl-trna synthetase | SAMEA3472110_05879 | Not Available | Positive | 5847067 - 5847423 | 13667.9 |
| beta-lactamase tem | SAMEA3472110_05880 | Not Available | Negative | 5847966 - 5848826 | 31517.0 |
| resolvase transposon tn3 | SAMEA3472110_05881 | Not Available | Negative | 5849009 - 5849566 | 20604.8 |
| transposase, transposon tn3 | SAMEA3472110_05882 | Not Available | Positive | 5849730 - 5852735 | 113130.0 |
| Trna-ala | Not Available | Not Available | Positive | 5856327 - 5856402 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





