Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb-like nuclease | SAMEA3472110_05864 | Not Available | Negative | 5832872 - 5834920 | 74674.9 |
| conserved putative protein | SAMEA3472110_05865 | Not Available | Negative | 5834889 - 5835122 | 9034.56 |
| single-stranded dna-binding protein | SAMEA3472110_05866 | Not Available | Negative | 5835180 - 5835761 | 21390.9 |
| protein disaggregation chaperone | SAMEA3472110_05867 | Not Available | Negative | 5836286 - 5838859 | 95604.9 |
| putative inner membrane protein | SAMEA3472110_05868 | Not Available | Negative | 5838989 - 5839720 | 26381.5 |
| 23s rrna pseudouridine synthase | SAMEA3472110_05869 | Not Available | Negative | 5839717 - 5840697 | 37095.8 |
| outer membrane protein assembly complex subunit yfio | SAMEA3472110_05870 | Not Available | Positive | 5840832 - 5841569 | 27830.9 |
| uncharacterised protein | SAMEA3472110_05871 | Not Available | Positive | 5841798 - 5842244 | 16702.7 |
| uncharacterised protein | SAMEA3472110_05872 | Not Available | Negative | 5842232 - 5842564 | 12086.6 |
| uncharacterised protein | SAMEA3472110_05873 | Not Available | Negative | 5842927 - 5843730 | 27359.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





