Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| operon control protein | SAMEA3472110_05825 | Not Available | Negative | 5804016 - 5804432 | 16775.3 |
| transcriptional regulator | SAMEA3472110_05826 | Not Available | Positive | 5804520 - 5805113 | 22747.6 |
| tetracycline resistance protein, class b (teta(b)) (metal-tetracycline/h(+) antiporter) | SAMEA3472110_05827 | Not Available | Negative | 5805226 - 5806431 | 43239.8 |
| tetracycline repressor protein tetr | SAMEA3472110_05828 | Not Available | Positive | 5806513 - 5807136 | 23386.0 |
| arsr family transcriptional regulator | SAMEA3472110_05829 | Not Available | Negative | 5807114 - 5807737 | 23123.0 |
| regulatory protein in the aminoacid metabolism | SAMEA3472110_05830 | Not Available | Negative | 5807808 - 5808194 | 13818.9 |
| monooxygenase | SAMEA3472110_05831 | Not Available | Negative | 5808187 - 5808507 | 12500.9 |
| putative glutamate permease | SAMEA3472110_05832 | Not Available | Positive | 5808951 - 5810156 | 42719.9 |
| uncharacterised protein | SAMEA3472110_05833 | Not Available | Positive | 5810208 - 5810312 | 4021.1 |
| lysr family transcriptional regulator | SAMEA3472110_05834 | Not Available | Positive | 5810387 - 5810512 | 4546.61 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





